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BaseInfo

ncRNA ID	novel_gra_miR406
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr10:56030192-56030260 [+]
Reference genome	Graimondii2_0
Source	SRR616257
Length	24
Mature sequence(if miRNA)	46 - CUAAAGGUCUUGGUCUUUAGCGGU - 69
Stem-loop(if miRNA)	--      U GU  U        A        GU   CGCUAA G  CA GAUCUUUA CGGCGUUU  G   |||||| |  || |||||||| ||||||||  G   GCGAUU C  GU CUGGAAAU GCCGCGAA  G UG      U UG  U        C        AA
Stem-loop sequence	CGCUAAUGGUCAUGAUCUUUAACGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCUUGGUCUUUAGCGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012599306.1	ncRNA:24   UGGCGAUUUCUGGUUCUGGAAAUC   1   *=****||=||||||||||||||| targets:2178   UUGAGGAAGGACCAAGACCUUUAG   2201 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii exocyst complex component EXO84B-like (LOC105776577), mRNA	exocyst complex component EXO84B-like(LOC105776577)	coding protein	psRNATarget
XM_012627970.1	ncRNA:24   UGG-----CGAUUUCUGGUUCUGGAAAUC   1   |=|-----|=||*|||||||||||*|||| targets:513   AUCAACGAGUUACAGACCAAGACCAUUAG   541 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii transcription factor TGA6-like (LOC105798073), mRNA	transcription factor TGA6-like(LOC105798073)	coding protein	psRNATarget