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BaseInfo

ncRNA ID novel_gra_miR397
Species Gossypium raimondii
Class miRNA
Genome position Chr6:32875396-32875580 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUUGCCUCUCAAGGCACUAGAGCU - 24
Stem-loop(if miRNA) --   A             A     AACUCAGUUU   GUUGGGAUGGACCAUUGGGGGGGGGGGUCAAGCCCUACAAAUGGCAAAUGUCCACUA
  CUC AGUGCCUUGAGAG CGGUG          CUU                                                         U
  ||| ||||||||||||| |||||          |||                                                         U
  GAG UCACGGAACUCUC GUUAC          GUG                                                         U
UC   A             C     ------CAAA   UCUCGUCCUCACGGAGCAGUUCUAUCUGGUACGUCCCGUUCACCGGUUGAUAUUACC
Stem-loop sequence CUCAAGUGCCUUGAGAGACGGUGAACUCAGUUUCUUGUUGGGAUGGACCAUUGGGGGGGGGGGUCAAGCCCUACAAAUGGCAAAUGUCCACUAUUUCCAUUAUAGUUGGCCACUUGCCCUGCAUGGUCUAUCUUGACGAGGCACUCCUGCUCUGUGAAACCAUUGCCUCUCAAGGCACUAGAGCU