ncRNA ID | novel_gra_miR396 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:50180422-50180535 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGUAGUUAGGCUACCACUUAUC - 24 |
Stem-loop(if miRNA) |
--    -     -A      C      CACU   -   CU    ---CA        -    U   AGUG UAGUU  GGCUAC ACUUAU    UUG UCA  UGAU     GAUAAGUG UAGC A   |||| |||||  |||||| ||||||    ||| |||  ||||     |||||||| ||||   UCAC AUCGA  UCGAUG UGAAUA    AAC AGU  ACUG     CUAUUCAC AUCG A AU    C     AA      -      ----   U   AC    UUUCA        C    A |
Stem-loop sequence | AGUGUAGUUAGGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGCUAAAGCUACCACUUAUCACUUUGUCACAUGAUCAAAUAAGUGUAGCUAAAGCUACCACUUA |