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BaseInfo

ncRNA ID novel_gra_miR395
Species Gossypium raimondii
Class miRNA
Genome position Chr10:44637388-44637549 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 139 - AGUGUAGUUAGGCUACCACUUAUC - 162
Stem-loop(if miRNA) --      -     AG     C       ACUUU    CU    ---CA        -     AA      C       ACUUU   A
  UAAGUG UAGCU  GCUAC ACUUAUC     GUCA  UGAU     GAUAAGUG UAGCU  AGCUAC ACUUAUC     GUC C
  |||||| |||||  ||||| |||||||     ||||  ||||     |||||||| |||||  |||||| |||||||     |||
  AUUCAC AUCGG  UGAUG UGAAUAG     UAGU  ACUG     CUAUUCAC AUCGG  UCGAUG UGAAUAG     UAG U
CU      C     AU     -       ---AC    UC    UUUCA        C     -A      -       ---AC   U
Stem-loop sequence UAAGUGUAGCUAGGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGCUAAAGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGCUAGGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGUUAGGCUACCACUUAUC