ncRNA ID | novel_gra_miR395 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr10:44637388-44637549 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 139 - AGUGUAGUUAGGCUACCACUUAUC - 162 |
Stem-loop(if miRNA) |
--      -     AG     C       ACUUU    CU    ---CA        -     AA      C       ACUUU   A   UAAGUG UAGCU  GCUAC ACUUAUC     GUCA  UGAU     GAUAAGUG UAGCU  AGCUAC ACUUAUC     GUC C   |||||| |||||  ||||| |||||||     ||||  ||||     |||||||| |||||  |||||| |||||||     |||   AUUCAC AUCGG  UGAUG UGAAUAG     UAGU  ACUG     CUAUUCAC AUCGG  UCGAUG UGAAUAG     UAG U CU      C     AU     -       ---AC    UC    UUUCA        C     -A      -       ---AC   U |
Stem-loop sequence | UAAGUGUAGCUAGGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGCUAAAGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGCUAGGCUACCACUUAUCACUUUGUCACUUGAUCAGAUAAGUGUAGUUAGGCUACCACUUAUC |