ncRNA ID | novel_gra_miR393 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr10:42778492-42778644 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 130 - CCACACGGCUUGAGACACGAGCGU - 153 |
Stem-loop(if miRNA) |
--  G         -        UU   --   CC   ---       A     GC      ---  GUGACCCAAGUCAGU   GC UGUGUCUCA GCCGUGUG  ACA  UGG  UAG   CACACGG UUGUG  UUAGCU   GU               G   || ||||||||| ||||||||  |||  |||  |||   ||||||| |||||  ||||||   ||   CG GCACAGAGU CGGCACAC  UGU  ACU  AUC   GUGUGCC AGCAC  GAUCGG   CA               A UG  A         U        -C   AA   UU   CCU       -     AA      GCA  GAUAUGGACACAUUG |
Stem-loop sequence | GCGUGUGUCUCAGCCGUGUGUUACAUGGCCUAGCACACGGAUUGUGGCUUAGCUGUGUGACCCAAGUCAGUGAGUUACACAGGUAUAGACACGGGCUAGAACACGACCGUGUGUCCCUAUUUCAAAUGUCCACACGGCUUGAGACACGAGCGU |