ncRNA ID | novel_gra_miR384 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:69328678-69328805 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 105 - AUGAAACUGUGAUUCCAUGUCAUC - 128 |
Stem-loop(if miRNA) |
--              CC              CC    C                      AGG   AUGAAACUGUGAUU  AUGUCAUCCUUAUU  UUUC AAUGGAAAAAUGACAAAUCAGG   A   ||||||||||||||  ||||||||||||||  |||| ||||||||||||||||||||||   UACUUUGAUACUAA  UGCAGUGGGGAUAG  AAAG UUAUUUUUUUACUGUUUAGUUU   A CA              AA              UA    A                      AAA |
Stem-loop sequence | AUGAAACUGUGAUUCCAUGUCAUCCUUAUUCCUUUCCAAUGGAAAAAUGACAAAUCAGGAGGAAAAAUUUGAUUUGUCAUUUUUUUAUUAGAAAAUGAUAGGGGUGACGUAAAAUCAUAGUUUCAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012613692.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA | probable WRKY transcription factor 9(LOC105787323) | coding protein | psRNATarget |