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BaseInfo

ncRNA ID novel_gra_miR384
Species Gossypium raimondii
Class miRNA
Genome position Chr9:69328678-69328805 [-]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 24
Mature sequence(if miRNA) 105 - AUGAAACUGUGAUUCCAUGUCAUC - 128
Stem-loop(if miRNA) --              CC              CC    C                      AGG
  AUGAAACUGUGAUU  AUGUCAUCCUUAUU  UUUC AAUGGAAAAAUGACAAAUCAGG   A
  ||||||||||||||  ||||||||||||||  |||| ||||||||||||||||||||||
  UACUUUGAUACUAA  UGCAGUGGGGAUAG  AAAG UUAUUUUUUUACUGUUUAGUUU   A
CA              AA              UA    A                      AAA
Stem-loop sequence AUGAAACUGUGAUUCCAUGUCAUCCUUAUUCCUUUCCAAUGGAAAAAUGACAAAUCAGGAGGAAAAAUUUGAUUUGUCAUUUUUUUAUUAGAAAAUGAUAGGGGUGACGUAAAAUCAUAGUUUCAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012613692.1
ncRNA:24   CUACUGUACCUUAGUGUCAAAGUA   1
  *||||||||||||||||||||=||
targets:1701   AAUGACAUGGAAUCACAGUUUUAU   1724

1.5 PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA probable WRKY transcription factor 9(LOC105787323) coding protein psRNATarget