ncRNA ID | novel_gra_miR377 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:6810599-6810652 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGGCGCCUAUCUCAGAGGCGCCA - 24 |
Stem-loop(if miRNA) |
--U       UA       --       A    UGGCGCC  UCUCAGA  GGCGCCA U    |||||||  |||||||  |||||||    ACCGCGG  AGGGUCU  CCGUGGU G AUU       --       AU       G |
Stem-loop sequence | UUGGCGCCUAUCUCAGAGGCGCCAAUGGUGGUGCCUAUCUGGGAGGCGCCAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012632413.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105801078 (LOC105801078), mRNA | uncharacterized LOC105801078(LOC105801078) | coding protein | psRNATarget | |||||||||
XM_012632413.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105801078 (LOC105801078), mRNA | uncharacterized LOC105801078(LOC105801078) | coding protein | psRNATarget |