ncRNA ID | novel_gra_miR372 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:62759316-62759397 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAAAAACUUGUGUGGUUGACGG - 24 |
Stem-loop(if miRNA) |
--       ------ACUU     GUUGACGGAAUAAGUAGACA   GUUAAAA          GUGUG                    C   |||||||          |||||   UAAUUUU          CAUGU                    G GA       AAACUAGUAA     AAUCUUACUCCAUAUGCACC |
Stem-loop sequence | GUUAAAAACUUGUGUGGUUGACGGAAUAAGUAGACACGCCACGUAUACCUCAUUCUAAUGUACAAUGAUCAAAUUUUAAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012625516.1 |
|
2.5 | PREDICTED: Gossypium raimondii guanine nucleotide-binding protein subunit gamma 3-like (LOC105795768), transcript variant X3, mRNA | guanine nucleotide-binding protein subunit gamma 3-like(LOC105795768) | coding protein | psRNATarget |