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BaseInfo

ncRNA ID novel_gra_miR372
Species Gossypium raimondii
Class miRNA
Genome position Chr5:62759316-62759397 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - GUUAAAAACUUGUGUGGUUGACGG - 24
Stem-loop(if miRNA) --       ------ACUU     GUUGACGGAAUAAGUAGACA
  GUUAAAA          GUGUG                    C
  |||||||          |||||
  UAAUUUU          CAUGU                    G
GA       AAACUAGUAA     AAUCUUACUCCAUAUGCACC
Stem-loop sequence GUUAAAAACUUGUGUGGUUGACGGAAUAAGUAGACACGCCACGUAUACCUCAUUCUAAUGUACAAUGAUCAAAUUUUAAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012625516.1
ncRNA:24   GGCAGUUGGUGUGUUCAAAAAUUG   1
  |||||||=|||||*||||||||||
targets:708   CCGUCAAUCACACUAGUUUUUAAC   731

2.5 PREDICTED: Gossypium raimondii guanine nucleotide-binding protein subunit gamma 3-like (LOC105795768), transcript variant X3, mRNA guanine nucleotide-binding protein subunit gamma 3-like(LOC105795768) coding protein psRNATarget