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BaseInfo

ncRNA ID novel_gra_miR371
Species Gossypium raimondii
Class miRNA
Genome position Chr5:59763223-59763310 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 65 - AUGUCUGGGACAUGACAUUGGCAC - 88
Stem-loop(if miRNA) ---G   GA        G        - ---AU   C   -   GAG
    UAA  UCAUGUCU GGACAUGG C     UGG AUC CUU   A
    |||  |||||||| |||||||| |     ||| ||| |||
    GUU  AGUACAGG UCUGUACC G     ACC UGG GAG   U
CACG   AC        G        A AAUGU   C   A   UAC
Stem-loop sequence GUAAGAUCAUGUCUGGGACAUGGCAUUGGCAUCCUUGAGAUCAUGAGAGGUCCCAUGUAAGACCAUGUCUGGGACAUGACAUUGGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012630291.1
ncRNA:24   CACGGUUACAGUACAGGGUCUGUA   1
  |||||||||**||||||||||||*
targets:1868   GUGCCAAUGGAAUGUCCCAGACAG   1891

3.0 PREDICTED: Gossypium raimondii exocyst complex component EXO70A1 (LOC105799625), mRNA exocyst complex component EXO70A1(LOC105799625) coding protein psRNATarget