ncRNA ID | novel_gra_miR371 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:59763223-59763310 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 65 - AUGUCUGGGACAUGACAUUGGCAC - 88 |
Stem-loop(if miRNA) |
---G   GA        G        - ---AU   C   -   GAG     UAA  UCAUGUCU GGACAUGG C     UGG AUC CUU   A     |||  |||||||| |||||||| |     ||| ||| |||     GUU  AGUACAGG UCUGUACC G     ACC UGG GAG   U CACG   AC        G        A AAUGU   C   A   UAC |
Stem-loop sequence | GUAAGAUCAUGUCUGGGACAUGGCAUUGGCAUCCUUGAGAUCAUGAGAGGUCCCAUGUAAGACCAUGUCUGGGACAUGACAUUGGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012630291.1 |
|
3.0 | PREDICTED: Gossypium raimondii exocyst complex component EXO70A1 (LOC105799625), mRNA | exocyst complex component EXO70A1(LOC105799625) | coding protein | psRNATarget |