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BaseInfo

ncRNA ID	novel_gra_miR364
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr4:40601921-40602019 [+]
Reference genome	Graimondii2_0
Source	SRR616257
Length	22
Mature sequence(if miRNA)	78 - UUGAUGGGCCUGCAUCGUCGUC - 99
Stem-loop(if miRNA)	--U   U   U   U    -   U  -    UG  G   G -A     --G U    GAC GUG CGG GCUC UCG UG GGCC  GU AUU A  UGGCU   C G    ||| ||| ||| |||| ||| || ||||  || ||| |  |||||   |    CUG UAC GUC CGGG AGU AC CCGG  CG UAA U  GCCGG   G A CUG   C   -   -    U   U  U    GU  G   G GG     GUA U
Stem-loop sequence	UGACUGUGUCGGUGCUCUCGUUGGGCCUGGUGAUUGAAUGGCUGCUGAUGAUGGGCCGGGUGAAUGGCUGGGCCUCAUUGAUGGGCCUGCAUCGUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012593582.1	ncRNA:22   CUGCUGCUACGUCCGGGUAGUU   1   ||||||||*||||||||||||| targets:483   GACGACGACGCAGGCCCAUCAA   504 Target Full Sequence	1.0	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X1, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012593583.1	ncRNA:22   CUGCUGCUACGUCCGGGUAGUU   1   ||||||||*||||||||||||| targets:473   GACGACGACGCAGGCCCAUCAA   494 Target Full Sequence	1.0	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X2, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012625755.1	ncRNA:22   CUGCUGCUACGUCCGGGUAGUU   1   ||||||||||||*||||||||| targets:476   GACGACGAUGCAAGCCCAUCAA   497 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105796152 (LOC105796152), mRNA	uncharacterized LOC105796152(LOC105796152)	coding protein	psRNATarget