| ncRNA ID | novel_gra_miR350 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr4:5201286-5201499 [-] |
| Reference genome | Graimondii2_0 |
| Source | SRR616257 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAAGGUAGGAAAACAGAGCGAGA - 24 |
| Stem-loop(if miRNA) |
-- C A UC C U C A - ----------AAGUC CUAUCAUCAUUUGCCUA UC CUCUGUUUUC UAUCUU U AUUUCUUUUAAC UAUUAGGAAGUCGAAUUGG AGUGGA AAAGAAGUA GG GA U || |||||||||| |||||| | |||||||||||| ||||||||||||||||||| |||||| ||||||||| || || A AG GAGACAAAAG AUGGAA A UAAAGAAAAUUG AUGGUCCUUCAGCUUAACC UCACUU UUUCUUCGU CC AA A AG C G GA A U A C A AUACUCAAAUACCCA ACCAAUAUCCCAAAACC |
| Stem-loop sequence | UCCCUCUGUUUUCAUAUCUUUCUCAUUUCUUUUAACUUAUUAGGAAGUCGAAUUGGCAGUGGAAAAAGAAGUAGGAAGUCGACUAUCAUCAUUUGCCUAUAACCAAAACCCUAUAACCAAAACCCAUAAACUCAUACCAUGCUUCUUUCUUCACUACCAAUUCGACUUCCUGGUAUGUUAAAAGAAAUAAAGAAGGUAGGAAAACAGAGCGAGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012619577.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105791495 (LOC105791495), transcript variant X1, mRNA | uncharacterized LOC105791495(LOC105791495) | coding protein | psRNATarget | |||||||||
| XM_012589665.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105769167 (LOC105769167), mRNA | uncharacterized LOC105769167(LOC105769167) | coding protein | psRNATarget |