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BaseInfo

ncRNA ID	novel_gra_miR345
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr4:36817561-36817638 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	22
Mature sequence(if miRNA)	57 - AAUCUCCCUCAAACGCUUCCAG - 78
Stem-loop(if miRNA)	--       CU     G         -AUA    ACACAC   AAUCUCC  CAAAC CUUCCAGCA    UGCU      U   |||||||  ||||| |||||||||    ||||   UUAGAGG  GUUUG GAAGGUCGU    ACGA      A AG       AG     -         CAUG    CCCCUC
Stem-loop sequence	AAUCUCCCUCAAACGCUUCCAGCAAUAUGCUACACACUACUCCCCAGCAGUACUGCUGGAAGGUUUGGAGGAGAUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012615331.1	ncRNA:22   GACCUUCGCAAACUCCCUCUAA   1   ||*|||||*||||||||||||* targets:145   CUAGAAGCAUUUGAGGGAGAUC   166 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii uncharacterized LOC105788430 (LOC105788430), mRNA	uncharacterized LOC105788430(LOC105788430)	coding protein	psRNATarget
XM_012624915.1	ncRNA:22   GACCUUCGCAAACUCCCUCUAA   1   ***||||=*||||||||||||| targets:316   AGUGAAGUUUUUGAGGGAGAUU   337 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii BEL1-like homeodomain protein 7 (LOC105795334), transcript variant X1, mRNA	BEL1-like homeodomain protein 7(LOC105795334)	coding protein	psRNATarget
XM_012624916.1	ncRNA:22   GACCUUCGCAAACUCCCUCUAA   1   ***||||=*||||||||||||| targets:471   AGUGAAGUUUUUGAGGGAGAUU   492 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii BEL1-like homeodomain protein 7 (LOC105795334), transcript variant X2, mRNA	BEL1-like homeodomain protein 7(LOC105795334)	coding protein	psRNATarget