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BaseInfo

ncRNA ID novel_gra_miR338
Species Gossypium raimondii
Class miRNA
Genome position Chr4:49887726-49887828 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 80 - CUAAUGCUUGGGGCUUUAGCGGCG - 103
Stem-loop(if miRNA) --    U    G    U            UUGA        C     U  U
  CUAA GCUU GGGC UUAGCGGCGUUU    AAAGGCGC GCUAA GC C
  |||| |||| |||| ||||||||||||    |||||||| ||||| || A
  GAUU CGGA CUUG AAUCGCCGCGAA    UUUUUGCG CGAUU CG G
GC    U    A    U            UAAA        A     U  G
Stem-loop sequence CUAAUGCUUGGGGCUUUAGCGGCGUUUUUGAAAAGGCGCCGCUAAUGCUCAGGGCUUUAGCAGCGUUUUUAAAUAAGCGCCGCUAAUGUUCAAGGCUUUAGCG