ncRNA ID | novel_gra_miR338 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:49887726-49887828 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 80 - CUAAUGCUUGGGGCUUUAGCGGCG - 103 |
Stem-loop(if miRNA) |
--    U    G    U            UUGA        C     U  U   CUAA GCUU GGGC UUAGCGGCGUUU    AAAGGCGC GCUAA GC C   |||| |||| |||| ||||||||||||    |||||||| ||||| || A   GAUU CGGA CUUG AAUCGCCGCGAA    UUUUUGCG CGAUU CG G GC    U    A    U            UAAA        A     U  G |
Stem-loop sequence | CUAAUGCUUGGGGCUUUAGCGGCGUUUUUGAAAAGGCGCCGCUAAUGCUCAGGGCUUUAGCAGCGUUUUUAAAUAAGCGCCGCUAAUGUUCAAGGCUUUAGCG |