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BaseInfo

ncRNA ID novel_gra_miR337
Species Gossypium raimondii
Class miRNA
Genome position Chr4:52012464-52012513 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 27 - UGGAUUAGGCUUUGGGCUAGGCUA - 50
Stem-loop(if miRNA) UGGAUUA     --   G      U
       GGCUU  UGG CUAGGC A
       |||||  ||| ||||||
       CCGGG  ACC GGUUUG G
CGGGUUA     UU   G      U
Stem-loop sequence UGGAUUAGGCUUUGGGCUAGGCUAGUGUUUGGGCCAUUGGGCCAUUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012627642.1
ncRNA:24   AUCGGAUCGGGUUUCGGAUUAGGU   1
  *|***|||=|||||*|||||||||
targets:125   GAAGAUAGUCCAAACCCUAAUCCA   148

2.5 PREDICTED: Gossypium raimondii uncharacterized LOC105797710 (LOC105797710), mRNA uncharacterized LOC105797710(LOC105797710) coding protein psRNATarget