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BaseInfo

ncRNA ID	novel_gra_miR334
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr10:13115904-13115946 [+]
Reference genome	Graimondii2_0
Source	SRR616257
Length	21
Mature sequence(if miRNA)	1 - CCAUGCUUUGUAGAUGGGCCU - 21
Stem-loop(if miRNA)	--  -A     U     U   CC   CC  UGCUU GUAGA GGG  U   ||  ||||| ||||| |||   GG  ACGAA CAUCU CUU  U UG  CA     -     -   AC
Stem-loop sequence	CCAUGCUUUGUAGAUGGGCCUUCAUUCUCUACAAGCAACGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012629165.1	ncRNA:21   UCCGGGUAGAUGUUUCGUACC   1   *||*=|||||||||||||||* targets:4511   UGGAUCAUCUACAAAGCAUGU   4531 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii enhancer of mRNA-decapping protein 4-like (LOC105798918), transcript variant X5, mRNA	enhancer of mRNA-decapping protein 4-like(LOC105798918)	coding protein	psRNATarget
XM_012629161.1	ncRNA:21   UCCGGGUAGAUGUUUCGUACC   1   *||*=|||||||||||||||* targets:4514   UGGAUCAUCUACAAAGCAUGU   4534 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii enhancer of mRNA-decapping protein 4-like (LOC105798918), transcript variant X1, mRNA	enhancer of mRNA-decapping protein 4-like(LOC105798918)	coding protein	psRNATarget
XM_012629164.1	ncRNA:21   UCCGGGUAGAUGUUUCGUACC   1   *||*=|||||||||||||||* targets:4616   UGGAUCAUCUACAAAGCAUGU   4636 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii enhancer of mRNA-decapping protein 4-like (LOC105798918), transcript variant X4, mRNA	enhancer of mRNA-decapping protein 4-like(LOC105798918)	coding protein	psRNATarget
XM_012629162.1	ncRNA:21   UCCGGGUAGAUGUUUCGUACC   1   *||*=|||||||||||||||* targets:4623   UGGAUCAUCUACAAAGCAUGU   4643 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii enhancer of mRNA-decapping protein 4-like (LOC105798918), transcript variant X2, mRNA	enhancer of mRNA-decapping protein 4-like(LOC105798918)	coding protein	psRNATarget
XM_012629163.1	ncRNA:21   UCCGGGUAGAUGUUUCGUACC   1   *||*=|||||||||||||||* targets:4722   UGGAUCAUCUACAAAGCAUGU   4742 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii enhancer of mRNA-decapping protein 4-like (LOC105798918), transcript variant X3, mRNA	enhancer of mRNA-decapping protein 4-like(LOC105798918)	coding protein	psRNATarget