ncRNA ID | novel_gra_miR333 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:45658796-45658932 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGUUAGAGGUCUGAACUGGCAA - 24 |
Stem-loop(if miRNA) |
--A       AGG        -           AUA   -UG    -UU      -----       UU   CA    GGGUUAG   UCUGAACU GGCAAUCAUUU   CAU   GGGC   AAUUUU     UUUUAAG  AGU  U    |||||||   |||||||| |||||||||||   |||   ||||   ||||||     |||||||  |||    UUUAAUC   AGAUUUGA CUGUUAGUAAG   GUA   UUCG   UUAAAA     AAAGUUC  UUA  G AGA       -AA        A           --A   UAA    CAC      UCUCA       CU   AA |
Stem-loop sequence | AGGGUUAGAGGUCUGAACUGGCAAUCAUUUAUACAUUGGGGCUUAAUUUUUUUUAAGUUAGUCAUGAAAUUUCCUUGAAAACUCUAAAAUUCACGCUUAAUAUGAGAAUGAUUGUCAAGUUUAGAAACUAAUUUAGA |