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BaseInfo

ncRNA ID novel_gra_miR333
Species Gossypium raimondii
Class miRNA
Genome position Chr3:45658796-45658932 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AGGGUUAGAGGUCUGAACUGGCAA - 24
Stem-loop(if miRNA) --A       AGG        -           AUA   -UG    -UU      -----       UU   CA
   GGGUUAG   UCUGAACU GGCAAUCAUUU   CAU   GGGC   AAUUUU     UUUUAAG  AGU  U
   |||||||   |||||||| |||||||||||   |||   ||||   ||||||     |||||||  |||
   UUUAAUC   AGAUUUGA CUGUUAGUAAG   GUA   UUCG   UUAAAA     AAAGUUC  UUA  G
AGA       -AA        A           --A   UAA    CAC      UCUCA       CU   AA
Stem-loop sequence AGGGUUAGAGGUCUGAACUGGCAAUCAUUUAUACAUUGGGGCUUAAUUUUUUUUAAGUUAGUCAUGAAAUUUCCUUGAAAACUCUAAAAUUCACGCUUAAUAUGAGAAUGAUUGUCAAGUUUAGAAACUAAUUUAGA