ncRNA ID | novel_gra_miR325 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:27930714-27930908 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAAUGCUUGGGGCUUUAGCGGCG - 24 |
Stem-loop(if miRNA) |
--    U    G    U           U                  U         ---            G         C     -----U    GGA   CUAA GCUU GGGC UUAGCGGCGUU UUUAAGAAGCGUUGCUAA GCUCGGGGU   AGCGGUAUUUUU AAAAAGCGC GCUAA      GCUG   A   |||| |||| |||| ||||||||||| |||||||||||||||||| |||||||||   |||||||||||| ||||||||| |||||      ||||   U   GAUU CGGG UUCG AAUCGCCGUGA AAAUUUUUUGCGGCGAUU UGGGUCUCG   UCGCCGUGAAAA UUUUUUGCG CGAUU      CGAC   U GC    U    G    U           U                  U         UGA            A         A     UUAUAC    GAU |
Stem-loop sequence | CUAAUGCUUGGGGCUUUAGCGGCGUUUUUUAAGAAGCGUUGCUAAUGCUCGGGGUAGCGGUAUUUUUGAAAAAGCGCCGCUAAUGCUGGGAAUUUAGCAGCCAUAUUUUAGCAGCGUUUUUUAAAAAGUGCCGCUAGUGCUCUGGGUUUUAGCGGCGUUUUUUAAAUAGUGCCGCUAAUGCUUGGGGCUUUAGCG |