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BaseInfo

ncRNA ID novel_gra_miR325
Species Gossypium raimondii
Class miRNA
Genome position Chr3:27930714-27930908 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - CUAAUGCUUGGGGCUUUAGCGGCG - 24
Stem-loop(if miRNA) --    U    G    U           U                  U         ---            G         C     -----U    GGA
  CUAA GCUU GGGC UUAGCGGCGUU UUUAAGAAGCGUUGCUAA GCUCGGGGU   AGCGGUAUUUUU AAAAAGCGC GCUAA      GCUG   A
  |||| |||| |||| ||||||||||| |||||||||||||||||| |||||||||   |||||||||||| ||||||||| |||||      ||||   U
  GAUU CGGG UUCG AAUCGCCGUGA AAAUUUUUUGCGGCGAUU UGGGUCUCG   UCGCCGUGAAAA UUUUUUGCG CGAUU      CGAC   U
GC    U    G    U           U                  U         UGA            A         A     UUAUAC    GAU
Stem-loop sequence CUAAUGCUUGGGGCUUUAGCGGCGUUUUUUAAGAAGCGUUGCUAAUGCUCGGGGUAGCGGUAUUUUUGAAAAAGCGCCGCUAAUGCUGGGAAUUUAGCAGCCAUAUUUUAGCAGCGUUUUUUAAAAAGUGCCGCUAGUGCUCUGGGUUUUAGCGGCGUUUUUUAAAUAGUGCCGCUAAUGCUUGGGGCUUUAGCG