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BaseInfo

ncRNA ID novel_gra_miR324
Species Gossypium raimondii
Class miRNA
Genome position Chr3:18171273-18171351 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 56 - AGCACACGGGCGUGUGACUUGGCU - 79
Stem-loop(if miRNA) --  U  -      AG      G  U GA      ACCCC
  CC GG CACACG  CGUGUG CU G  CGUGUG     A
  || || ||||||  |||||| || |  ||||||     G
  GG UC GUGUGC  GCACAC GA C  GCACAC     C
UC  U  A      GG      -  U AA      AUCCA
Stem-loop sequence CCUGGCACACGAGCGUGUGGCUUGGACGUGUGACCCCAGCACCUACACACGAACUAGCACACGGGCGUGUGACUUGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012591859.1
ncRNA:24   UCGGUUCAGUGUGCGGGCACACGA   1
  =|=|==||||||||*|||||||||
targets:734   GGUCGGGUCACACGGCCGUGUGCU   757

2.5 PREDICTED: Gossypium raimondii uncharacterized LOC105770575 (LOC105770575), transcript variant X4, mRNA uncharacterized LOC105770575(LOC105770575) coding protein psRNATarget