ncRNA ID | novel_gra_miR324 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:18171273-18171351 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 56 - AGCACACGGGCGUGUGACUUGGCU - 79 |
Stem-loop(if miRNA) |
--  U  -      AG      G  U GA      ACCCC   CC GG CACACG  CGUGUG CU G  CGUGUG     A   || || ||||||  |||||| || |  ||||||     G   GG UC GUGUGC  GCACAC GA C  GCACAC     C UC  U  A      GG      -  U AA      AUCCA |
Stem-loop sequence | CCUGGCACACGAGCGUGUGGCUUGGACGUGUGACCCCAGCACCUACACACGAACUAGCACACGGGCGUGUGACUUGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012591859.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105770575 (LOC105770575), transcript variant X4, mRNA | uncharacterized LOC105770575(LOC105770575) | coding protein | psRNATarget |