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BaseInfo

ncRNA ID novel_gra_miR319
Species Gossypium raimondii
Class miRNA
Genome position Chr3:1023840-1023962 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - ACAUAUCAGGAAGUUGAAUUGGCA - 24
Stem-loop(if miRNA) --                      C   GA           U  UAU     -UU      AGG
  ACAUAUCAGGAAGUUGAAUUGG AGU  AGAAAGAAGCA GG   GGGUU   GGUUAU   C
  |||||||||||||||||||||| |||  ||||||||||| ||   |||||   ||||||
  UGUAUAGUCCUUCAGCUUAACC UCA  UCUUUCUUCGU CC   UUCGG   UCGGUA   A
AU                      A   AA           -  ---     CUU      GUA
Stem-loop sequence ACAUAUCAGGAAGUUGAAUUGGCAGUGAAGAAAGAAGCAUGGUAUGGGUUUUGGUUAUAGGCAAUGAUGGCUUUCGGCUUCCUGCUUCUUUCUAAACUACCAAUUCGACUUCCUGAUAUGUUA