ncRNA ID | novel_gra_miR313 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:30195169-30195233 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUAAAGGUCUUGGUCUUUAGCG - 22 |
Stem-loop(if miRNA) |
--      GU UU GU      C       GU   CUAAAG  C  G  CUUUAG GGCGUUU  G   ||||||  |  |  |||||| |||||||  G   GAUUUC  G  C  GAAAUU CUGCGAA  G GC      UG UU UG      A       AA |
Stem-loop sequence | CUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGGAAAAGCGUCAUUAAAGGUCUUGGUCUUUAGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012599306.1 |
|
3.0 | PREDICTED: Gossypium raimondii exocyst complex component EXO84B-like (LOC105776577), mRNA | exocyst complex component EXO84B-like(LOC105776577) | coding protein | psRNATarget |