ncRNA ID | novel_gra_miR312 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr2:55022055-55022104 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGCUUGUUUGUUAGGCUUGAGCC - 24 |
Stem-loop(if miRNA) |
--     UG   G     C UG      AGGCU  UUU UUAGG U  AGCC   |||||  ||| ||||| |  |||C   UUUGG  AAA AAUCC A  UCGA AG     GU   A     - GU    |
Stem-loop sequence | AGGCUUGUUUGUUAGGCUUGAGCCCAGCUUGACCUAAAAAAUGGGUUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012611193.1 |
|
2.5 | PREDICTED: Gossypium raimondii structural maintenance of chromosomes protein 2-1 (LOC105785233), mRNA | structural maintenance of chromosomes protein 2-1(LOC105785233) | coding protein | psRNATarget |