Search result

BaseInfo

ncRNA ID novel_gra_miR301
Species Gossypium raimondii
Class miRNA
Genome position Chr13:39731813-39731877 [-]
Reference genome Graimondii2_0
Source SRR616256
Length 22
Mature sequence(if miRNA) 1 - CUAAAGGACCUGGUCUUUAGCG - 22
Stem-loop(if miRNA) --      GU UU    -             GU
  CUAAAG  C  GGUC UUUAGCGGUGUUU  G
  ||||||  |  |||| |||||||||||||  G
  GAUUUC  G  CCAG AAAUCGCCGCGAA  A
GC      UG -U    G             AA
Stem-loop sequence CUAAAGGUCUUGGUCUUUAGCGGUGUUUGUGGAAAAAGCGCCGCUAAAGGACCUGGUCUUUAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012602423.1
ncRNA:22   GCGAUUUCUGGUCCAGGAAAUC   1
  *|*|||||||||||*||||||*
targets:821   AGGUAAAGACCAGGCCCUUUAC   842

2.5 PREDICTED: Gossypium raimondii protein SAWADEE HOMEODOMAIN HOMOLOG 2-like (LOC105778671), mRNA protein SAWADEE HOMEODOMAIN HOMOLOG 2-like(LOC105778671) coding protein psRNATarget