ncRNA ID | novel_gra_miR301 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:39731813-39731877 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616256 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUAAAGGACCUGGUCUUUAGCG - 22 |
Stem-loop(if miRNA) |
--      GU UU    -             GU   CUAAAG  C  GGUC UUUAGCGGUGUUU  G   ||||||  |  |||| |||||||||||||  G   GAUUUC  G  CCAG AAAUCGCCGCGAA  A GC      UG -U    G             AA |
Stem-loop sequence | CUAAAGGUCUUGGUCUUUAGCGGUGUUUGUGGAAAAAGCGCCGCUAAAGGACCUGGUCUUUAGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012602423.1 |
|
2.5 | PREDICTED: Gossypium raimondii protein SAWADEE HOMEODOMAIN HOMOLOG 2-like (LOC105778671), mRNA | protein SAWADEE HOMEODOMAIN HOMOLOG 2-like(LOC105778671) | coding protein | psRNATarget |