Search result

BaseInfo

ncRNA ID novel_gra_miR293
Species Gossypium raimondii
Class miRNA
Genome position Chr8:16455946-16456130 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 162 - CUAAAGAUCUGAGCUUUAGCGGCG - 185
Stem-loop(if miRNA) --    A A  U  G              CA       -         -----      GAGCAUUA      C       AA  -         A AU
  CUAA G UC GA CUUUAGCGGCGUUU  UGGAAAA CGCCGCUAA     AGAUCU        GCGGCG UUUUUCA  AA CGCCACUAA G  C
  |||| | || || ||||||||||||||  ||||||| |||||||||     ||||||        |||||| |||||||  || ||||||||| |  U
  GAUU C AG CU GAAAUCGCCGCAAA  ACUUUUU GCGGCGAUU     UCUAGA        CGCCGC AAAAGGU  UU GCGGUGAUU C  G
GC    A G  U  A              -A       C         ACGAG      -----AAG      -       AC  C         A GA
Stem-loop sequence CUAAAGAUCUGAGCUUUAGCGGCGUUUCAUGGAAAACGCCGCUAAAGAUCUGAGCAUUAGCGGCGCUUUUUCAAAAACGCCACUAAAGAUCUGAGCAUUAGUGGCGCUUCAUGGAAAACGCCGCGAAAGAUCUGAGCAUUAGCGGCGCUUUUUCAAAAACGCCGCUAAAGAUCUGAGCAUUAGCG