ncRNA ID | novel_gra_miR293 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:16455946-16456130 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 162 - CUAAAGAUCUGAGCUUUAGCGGCG - 185 |
Stem-loop(if miRNA) |
--    A A  U  G              CA       -         -----      GAGCAUUA      C       AA  -         A AU   CUAA G UC GA CUUUAGCGGCGUUU  UGGAAAA CGCCGCUAA     AGAUCU        GCGGCG UUUUUCA  AA CGCCACUAA G  C   |||| | || || ||||||||||||||  ||||||| |||||||||     ||||||        |||||| |||||||  || ||||||||| |  U   GAUU C AG CU GAAAUCGCCGCAAA  ACUUUUU GCGGCGAUU     UCUAGA        CGCCGC AAAAGGU  UU GCGGUGAUU C  G GC    A G  U  A              -A       C         ACGAG      -----AAG      -       AC  C         A GA |
Stem-loop sequence | CUAAAGAUCUGAGCUUUAGCGGCGUUUCAUGGAAAACGCCGCUAAAGAUCUGAGCAUUAGCGGCGCUUUUUCAAAAACGCCACUAAAGAUCUGAGCAUUAGUGGCGCUUCAUGGAAAACGCCGCGAAAGAUCUGAGCAUUAGCGGCGCUUUUUCAAAAACGCCGCUAAAGAUCUGAGCAUUAGCG |