ncRNA ID | novel_gra_miR292 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:22183459-22183519 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGUGUGCAGGGGGUGGAAUA - 21 |
Stem-loop(if miRNA) |
--                 UG --AC    G   UUCCAUCUCUUGCACAC  G    AAGU C   |||||||||||||||||  |    |||| U   AAGGUGGGGGACGUGUG  C    UUCG G AU                 GU GGAC    G |
Stem-loop sequence | UUCCAUCUCUUGCACACUGGACAAGUGCUGGGCUUCAGGCUGGUGUGCAGGGGGUGGAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012630335.1 |
|
2.5 | PREDICTED: Gossypium raimondii putative pentatricopeptide repeat-containing protein At3g11460 (LOC105799665), mRNA | putative pentatricopeptide repeat-containing protein At3g11460(LOC105799665) | coding protein | psRNATarget |