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BaseInfo

ncRNA ID novel_gra_miR288
Species Gossypium raimondii
Class miRNA
Genome position Chr1:25793115-25793174 [-]
Reference genome Graimondii2_0
Source SRR616256
Length 24
Mature sequence(if miRNA) 1 - AAAGCGCUCUGACGUGGACGCGAU - 24
Stem-loop(if miRNA) -      CUCGUAGGCGCGAUUUGUGUCC
 CGCGUC                      A
 ||||||                      C
 AGCGCA                      G
U      GGUGCAGUCUCGCGAAACGAAU
Stem-loop sequence CGCGUCCUCGUAGGCGCGAUUUGUGUCCACGUAAGCAAAGCGCUCUGACGUGGACGCGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012622070.1
ncRNA:24   UAGCGCAGGUGCAGUCUCGCGAAA   1
  ||||||||||||||||*||||||*
targets:1130   AUCGCGUCCACGUCAGCGCGCUUA   1153

2.5 PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA uncharacterized LOC105793143(LOC105793143) coding protein psRNATarget