ncRNA ID | novel_gra_miR281 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:282536-282651 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616256 |
Length | 22 |
Mature sequence(if miRNA) | 95 - UUGAGUCAAGAAUGACUUGCCG - 116 |
Stem-loop(if miRNA) |
--U           UG          --UU   GUCAAAGGUAAUAGGUGAUUAGCCGG    UGAGUCAAGAA  ACUUGCCGGA    UAC                          C    |||||||||||  ||||||||||    |||    ACUUAGUUCUU  UGAACGGCUU    AUU                          U UCC           GU          UCUA   UACUUUCGGCCCAUUAUAAUUUACUU |
Stem-loop sequence | UUGAGUCAAGAAUGACUUGCCGGAUUUACGUCAAAGGUAAUAGGUGAUUAGCCGGCUUUCAUUUAAUAUUACCCGGCUUUCAUUUAAUCUUUCGGCAAGUUGUUCUUGAUUCACCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012579564.1 |
|
2.5 | PREDICTED: Gossypium raimondii nuclear transcription factor Y subunit A-10-like (LOC105761685), transcript variant X1, mRNA | nuclear transcription factor Y subunit A-10-like(LOC105761685) | coding protein | psRNATarget |