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BaseInfo

ncRNA ID	novel_gra_miR279
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr9:9866380-9866549 [-]
Reference genome	Graimondii2_0
Source	SRR616256
Length	24
Mature sequence(if miRNA)	147 - AACGGCAGUCCUACGUGGCAGUCU - 170
Stem-loop(if miRNA)	--     CA                                                AGU   UAG   AA    -      UUAA   AACGG  GUCCUACGUGGCAGUCUAAAUGGGUUUUAAAUGCCAACUUGGAUGUCU   UGC   GAU  AAAU AGGUUU    U   |||||  ||||||||||||||||||||||||||||||||||||||||||||||||   |||   |||  |||| ||||||   UUGUC  UAGGAUGCACCGUCAGGUUUACCCAAAAUUUACGGUUGAACCUACAGG   GCG   UUA  UUUA UUUAAA    U GA     AC                                                -AU   CCA   GG    A      UAAA
Stem-loop sequence	AACGGCAGUCCUACGUGGCAGUCUAAAUGGGUUUUAAAUGCCAACUUGGAUGUCUAGUUGCUAGGAUAAAAAUAGGUUUUUAAUUAAAUAAAUUUAAUUUGGAUUACCGCGUAGGACAUCCAAGUUGGCAUUUAAAACCCAUUUGGACUGCCACGUAGGAUCACUGUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012587081.1	ncRNA:24   UCUGACGGUGCAUCCUGACGGCAA   1   |||||||||=|||||||||=|||| targets:9   AGACUGCCAUGUAGGACUGUCGUU   32 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii nicotianamine synthase-like (LOC105767526), mRNA	nicotianamine synthase-like(LOC105767526)	coding protein	psRNATarget