ncRNA ID | novel_gra_miR275 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:3737392-3737561 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616256;SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACGGCAGUCUUACGUGGCAGUCC - 24 |
Stem-loop(if miRNA) |
--      A                                     C          AGUUGUU    - GAAAAUAGGUUCUUAGU   AACGGC GUCUUACGUGGCAGUCCAAAUGGGUUUUAAAUGCCAA UUGGAUGUCC       GGGA U                 U   |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||       |||| |                 A   UUGCCG CAGGAUGCACCGUCAGGUUUACUCAAAAUUUAUGGUU AACCUACAGG       CAGU U                 A GA      C                                     A          ----AUG    G UAAGUUAAAUUUAAAUA |
Stem-loop sequence | AACGGCAGUCUUACGUGGCAGUCCAAAUGGGUUUUAAAUGCCAACUUGGAUGUCCAGUUGUUGGGAUGAAAAUAGGUUCUUAGUUAAAUAAAUUUAAAUUGAAUUGUGACGUAGGACAUCCAAAUUGGUAUUUAAAACUCAUUUGGACUGCCACGUAGGACCGCCGUUAG |