Search result

BaseInfo

ncRNA ID novel_gra_miR265
Species Gossypium raimondii
Class miRNA
Genome position Chr7:14082825-14082904 [-]
Reference genome Graimondii2_0
Source SRR616256;SRR616257;SRR616255
Length 21
Mature sequence(if miRNA) 60 - UGACAAUGAGAGAGAGCACGC - 80
Stem-loop(if miRNA) --         G               UGC         A
  UGACAAUGA AGAGAGCACGCUUGU   CAUUCAUGC A
  ||||||||| |||||||||||||||   |||||||||
  ACUGUUGCU UCUCUCGUGCGAACA   GUAGGUACG G
AU         G               UAU         G
Stem-loop sequence UGACAAUGAGAGAGAGCACGCUUGUUGCCAUUCAUGCAAGGGCAUGGAUGUAUACAAGCGUGCUCUCUGUCGUUGUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012586153.1
ncRNA:21   CGCACGAGAGAGAGUAACAGU   1
  *|***||||||||||||||||
targets:61   CCUCUCUCUCUCUCAUUGUCA   81

3.0 PREDICTED: Gossypium raimondii B3 domain-containing protein At2g36080-like (LOC105766627), mRNA B3 domain-containing protein At2g36080-like(LOC105766627) coding protein psRNATarget