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BaseInfo

ncRNA ID	novel_gra_miR263
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr7:15901189-15901358 [-]
Reference genome	Graimondii2_0
Source	SRR616256
Length	24
Mature sequence(if miRNA)	147 - AACGGCAGUCCUACGUGGCAGUCU - 170
Stem-loop(if miRNA)	--     CA               C                                --A  U C   GA    AA         AA   AACGG  GUCCUACGUGGCAGU UAAAUGGGUUUUAAAUGUCAACUUGGAUGUCU   GU G UAG  UAAA  UAGGUUUUU  U   |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||   || | |||  ||||  |||||||||   UUGUC  UAGGAUGUACCGUCA GUUUACCCAAAAUUUACGGUUGAAUUUACAGG   CA C AUC  GUUU  AUUUAAAAA  U GA     AC               A                                AUG  C -   AG    -A         AA
Stem-loop sequence	AACGGCAGUCCUACGUGGCAGUCUAAAUGGGUUUUAAAUGUCAACUUGGAUGUCUAGUUGCUAGGAUAAAAAUAGGUUUUUAAUUAAAAAAAUUUAAUUUGGACUACCACGUAGGACAUUUAAGUUGGCAUUUAAAACCCAUUUGAACUGCCAUGUAGGAUCACUGUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012587081.1	ncRNA:24   UCUGACGGUGCAUCCUGACGGCAA   1   |||||||||=|||||||||=|||| targets:9   AGACUGCCAUGUAGGACUGUCGUU   32 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii nicotianamine synthase-like (LOC105767526), mRNA	nicotianamine synthase-like(LOC105767526)	coding protein	psRNATarget