ncRNA ID | novel_gra_miR262 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:18680484-18680577 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616256;SRR616255 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAGGUUUGUGAUGGCACCUGG - 22 |
Stem-loop(if miRNA) |
--    -   AA      A      U  UU     CCA    --     C   AGGU CCA  AUAGGC UUUGAA AC  AACAU   CGUA  GCAAU G   |||| |||  |||||| |||||| ||  |||||   ||||  ||||| A   UCCA GGU  UGUUUG GAACUU UG  UUGUA   GCAU  UGUUG C GG    C   AG      -      -  CC     --C    GA     C |
Stem-loop sequence | AGGUCCAAAAUAGGCAUUUGAAUACUUAACAUCCACGUAGCAAUCGACCGUUGUAGUACGCAUGUUCCGUUUCAAGGUUUGUGAUGGCACCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012632159.1 |
|
2.5 | PREDICTED: Gossypium raimondii lysine-specific demethylase REF6-like (LOC105800814), mRNA | lysine-specific demethylase REF6-like(LOC105800814) | coding protein | psRNATarget |