| ncRNA ID | novel_gra_miR259 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr6:19375593-19375764 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616256 |
| Length | 24 |
| Mature sequence(if miRNA) | 149 - AGACGUGAGUUUGAGUGCGCUGAA - 172 |
| Stem-loop(if miRNA) |
-- UA C A C GC C A UA GU - UG UGGAAAGGGU UAGUGCACUCGAACUCA UC UCCU CA UG AA AAU U AU CAAUCGAGUUAA GACUCAAU GCA U ||||||||||||||||| || |||| || || || ||| | || |||||||||||| |||||||| ||| U GUCGCGUGAGUUUGAGU AG AGGA GU AC UU UUA G UA GUUAGCUCGAUU CUGAGUUA UGU U AA GC A C A UA A C GG UG U GU UAAAAAAAAA |
| Stem-loop sequence | UAGUGCACUCGAACUCAUAUCCUCCUACACUGGCAACAAUAUUAAUGUCAAUCGAGUUAAGACUCAAUUGGCAUGGAAAGGGUUUUAAAAAAAAAUUGUUGAUUGAGUCUUUAGCUCGAUUGGUAUGGGCAUUAUUAUCAAUGCAGGAAGACGUGAGUUUGAGUGCGCUGAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012611710.1 |
|
2.0 | PREDICTED: Gossypium raimondii short-chain dehydrogenase reductase 2a (LOC105785598), transcript variant X2, mRNA | short-chain dehydrogenase reductase 2a(LOC105785598) | coding protein | psRNATarget | |||||||||
| XM_012611709.1 |
|
2.0 | PREDICTED: Gossypium raimondii short-chain dehydrogenase reductase 2a (LOC105785598), transcript variant X1, mRNA | short-chain dehydrogenase reductase 2a(LOC105785598) | coding protein | psRNATarget |