| ncRNA ID | novel_gra_miR254 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr5:1001246-1001444 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616256 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUGAAACUGUGAUUCCAUGUCAUC - 24 |
| Stem-loop(if miRNA) |
-- C C U C C C C A - ----CCUC CA AUGAAA UGUGAUU CAUG CAUCCUUAU C UUUC AAUAGGAGAAUGACAAAU GGAUUUUUCCUCUUGAUUUUUA C UUUUU UUGA A |||||| ||||||| |||| ||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||| | ||||| |||| UACUUU ACACUAA GUGC GUAGGAAUA G AAAG UUAUCCUCUUACUGUUUA UCUAAAAAGGAGGAUUGAAAAU G AAAAA AACU A CA A U U A U A U C U UUAAUCUA UA |
| Stem-loop sequence | AUGAAACUGUGAUUCCAUGUCAUCCUUAUCCCUUUCCAAUAGGAGAAUGACAAAUCGGAUUUUUCCUCUUGAUUUUUAACUUUUUCCUCUUGACAAAAUUCAAAUCUAAUUAAAAAUGCUAAAAGUUAGGAGGAAAAAUCUUAUUUGUCAUUCUCCUAUUAGAAAUGAAUAAGGAUGUCGUGUAAUCACAAUUUCAUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012613692.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA | probable WRKY transcription factor 9(LOC105787323) | coding protein | psRNATarget |