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BaseInfo

ncRNA ID	novel_gra_miR244
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr3:32353709-32353807 [-]
Reference genome	Graimondii2_0
Source	SRR616256;SRR616257
Length	21
Mature sequence(if miRNA)	1 - UGAUGGGCCUGCAUCGUCGUC - 21
Stem-loop(if miRNA)	--U   U   U   U    -   U  -    UG -      AA     G UG    GAC GUG CGG GCUC UCG UG GGCC  G UGAUUA  UGGCC C  A    ||| ||| ||| |||| ||| || ||||  | ||||||  ||||| |  U    CUG UAC GUC CGGG AGU GC CCGG  C GUUAGU  GUCGG G  G CUG   C   -   -    U   U  U    GU U      GG     - UA
Stem-loop sequence	UGACUGUGUCGGUGCUCUCGUUGGGCCUGGUGAUUAAAUGGCCGCUGAUGAUGGGCUGGGUGAUUGUCUGGGCCUCGUUGAUGGGCCUGCAUCGUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012593582.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||*|||||||||||| targets:483   GACGACGACGCAGGCCCAUCA   503 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X1, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012593583.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||*|||||||||||| targets:473   GACGACGACGCAGGCCCAUCA   493 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X2, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012625755.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||||||*|||||||| targets:476   GACGACGAUGCAAGCCCAUCA   496 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105796152 (LOC105796152), mRNA	uncharacterized LOC105796152(LOC105796152)	coding protein	psRNATarget