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BaseInfo

ncRNA ID	novel_gra_miR240
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr2:26354448-26354499 [+]
Reference genome	Graimondii2_0
Source	SRR616256
Length	21
Mature sequence(if miRNA)	32 - UGAUGGGCCUGCAUCGUCGUC - 52
Stem-loop(if miRNA)	--  C    -  U    AA   -    G   CG AUGG GC GGGC  AUU UCUG G   || |||| || ||||  ||| ||||   GC UGCU CG UCCG  UAG GGAU C CU  -    A  -    GG   U    A
Stem-loop sequence	CGCAUGGGCUGGGCAAAUUUCUGGGCAUAGGUGAUGGGCCUGCAUCGUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012593582.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||*|||||||||||| targets:483   GACGACGACGCAGGCCCAUCA   503 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X1, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012593583.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||*|||||||||||| targets:473   GACGACGACGCAGGCCCAUCA   493 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X2, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012625755.1	ncRNA:21   CUGCUGCUACGUCCGGGUAGU   1   ||||||||||||*|||||||| targets:476   GACGACGAUGCAAGCCCAUCA   496 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105796152 (LOC105796152), mRNA	uncharacterized LOC105796152(LOC105796152)	coding protein	psRNATarget