ncRNA ID | novel_gra_miR234 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:39889110-39889326 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGCUUAGAGCUUUAGCGGCGUU - 24 |
Stem-loop(if miRNA) |
--         U    AG                  GG           A   AAA  --       ----          UUUU  A    UU  GGA   A  A       U   CGCCGCUAA GCUC  GGCAUUAGCGGCGUUUUU  GAAAGCGCCGC AAA   CU  AAGCUCA    ACGGCGCCGU    UG GCUU  GU   UUU GC GCGUUUU G   ||||||||| ||||  ||||||||||||||||||  ||||||||||| |||   ||  |||||||    ||||||||||    || ||||  ||   ||| || |||||||   GCGGCGAUU CGAG  UCGUAAUCGUCGCGAAAG  UUUUUGCGGCG UUU   GG  UUCGAGU    UGCCGCGGCA    AC CGAA  CA   AAA CG CGCGAAA G UU         U    AU                  AA           A   AGG  CU       CUUU          ----  C    -U  AAA   A  C       G |
Stem-loop sequence | CGCCGCUAAUGCUCAGGGCAUUAGCGGCGUUUUUGGGAAAGCGCCGCAAAAAAACUAAGCUCAACGGCGCCGUUUUUUGAGCUUUUGUGGAUUUAGCAGCGUUUUUGGGAAAGCGCCGCAAAAAAAACUAAGCCCAACGGCGCCGUUUUCUGAGCUUUCGGGGAUUUAGCGGCGUUUUUAAGAAAGCGCUGCUAAUGCUUAGAGCUUUAGCGGCGUU |