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BaseInfo

ncRNA ID novel_gra_miR230
Species Gossypium raimondii
Class miRNA
Genome position Chr7:52558594-52558820 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 204 - AGUUAAUGUUUGUUAACUUUGCUG - 227
Stem-loop(if miRNA) --                    G    CU         C  A    GC   G   -         C A          A     U            CUCAAAAAAAUUAAAAA
  AGUUAAUGUUUGUUAACUUU CUGA  UGGCAUACG GU GAUU  CAC UGG AUGCCACAU A UAAUUAAUUA UUUUU AAAAUUUAAAAA                 A
  |||||||||||||||||||| ||||  ||||||||| || ||||  ||| ||| ||||||||| | |||||||||| ||||| ||||||||||||                 A
  UCAAUUACAAACAAUUGAAA GACU  ACCGUAUGU CA CUAA  GUG GUC UAUGGUGUA U AUUAAUUAAU AAAAA UUUUAAAUUUUU                 G
UU                    G    AC         A  C    AA   -   A         A C          A     U            AUAAAAUAUAAAAAUAU
Stem-loop sequence AGUUAAUGUUUGUUAACUUUGCUGACUUGGCAUACGCGUAGAUUGCCACGUGGAUGCCACAUCAAUAAUUAAUUAAUUUUUUAAAAUUUAAAAACUCAAAAAAAUUAAAAAAAGUAUAAAAAUAUAAAAUAUUUUUAAAUUUUUAAAAAAUAAUUAAUUACUAAUGUGGUAUACUGGUGAAAAUCCACAUGUAUGCCACAUCAGGAAAGUUAACAAACAUUAACUUU