ncRNA ID | novel_gra_miR230 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:52558594-52558820 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 204 - AGUUAAUGUUUGUUAACUUUGCUG - 227 |
Stem-loop(if miRNA) |
--                    G    CU         C  A    GC   G   -         C A          A     U            CUCAAAAAAAUUAAAAA   AGUUAAUGUUUGUUAACUUU CUGA  UGGCAUACG GU GAUU  CAC UGG AUGCCACAU A UAAUUAAUUA UUUUU AAAAUUUAAAAA                 A   |||||||||||||||||||| ||||  ||||||||| || ||||  ||| ||| ||||||||| | |||||||||| ||||| ||||||||||||                 A   UCAAUUACAAACAAUUGAAA GACU  ACCGUAUGU CA CUAA  GUG GUC UAUGGUGUA U AUUAAUUAAU AAAAA UUUUAAAUUUUU                 G UU                    G    AC         A  C    AA   -   A         A C          A     U            AUAAAAUAUAAAAAUAU |
Stem-loop sequence | AGUUAAUGUUUGUUAACUUUGCUGACUUGGCAUACGCGUAGAUUGCCACGUGGAUGCCACAUCAAUAAUUAAUUAAUUUUUUAAAAUUUAAAAACUCAAAAAAAUUAAAAAAAGUAUAAAAAUAUAAAAUAUUUUUAAAUUUUUAAAAAAUAAUUAAUUACUAAUGUGGUAUACUGGUGAAAAUCCACAUGUAUGCCACAUCAGGAAAGUUAACAAACAUUAACUUU |