ncRNA ID | novel_gra_miR227 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:53721447-53721590 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAAUGUUCUGGGCUUUAGCGGCG - 24 |
Stem-loop(if miRNA) |
--    U    U    U             UAUGU            U    UG    -            UU   CUAA GUUC GGGC UUAGCGGCGUUUU     AAGCGCCGCUAA GUUC  GGAU UUAGCGGCGUUU  A   |||| |||| |||| |||||||||||||     |||||||||||| ||||  |||| ||||||||||||   GAUU CGGG CUUG AAUCGCCGCGAAA     UUUGCGGUGAUU UAGG  CUUG AAUCGCCGCGAA  U GC    U    U    U             UGAUU            -    GU    U            UU |
Stem-loop sequence | CUAAUGUUCUGGGCUUUAGCGGCGUUUUUAUGUAAGCGCCGCUAAUGUUCUGGGAUUUAGCGGCGUUUUUAUUUAAGCGCCGCUAAUGUUCUGGGAUUUAGUGGCGUUUUUAGUAAAGCGCCGCUAAUGUUCUGGGCUUUAGCG |