| ncRNA ID | novel_gra_miR221 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr7:5568619-5568692 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255;SRR616257 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - UCCUGUCGCAAGGGAGAUGGUG - 22 |
| Stem-loop(if miRNA) |
-- U A --A UUU UCCUG CGCA GGGAGAUGGUGU UAUUUCA A ||||| |||| |||||||||||| ||||||| U AGGAC GCGU CUCUCUGCCACA AUAGAGU G UU C - CAG UAA |
| Stem-loop sequence | UCCUGUCGCAAGGGAGAUGGUGUAUAUUUCAUUUAUGAAUUGAGAUAGACACACCGUCUCUCUGCGCCAGGAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012599970.1 |
|
2.5 | PREDICTED: Gossypium raimondii calcium-transporting ATPase 9, plasma membrane-type-like (LOC105776976), transcript variant X2, mRNA | calcium-transporting ATPase 9, plasma membrane-type-like(LOC105776976) | coding protein | psRNATarget | |||||||||
| XM_012599969.1 |
|
2.5 | PREDICTED: Gossypium raimondii calcium-transporting ATPase 9, plasma membrane-type-like (LOC105776976), transcript variant X1, mRNA | calcium-transporting ATPase 9, plasma membrane-type-like(LOC105776976) | coding protein | psRNATarget |