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BaseInfo

ncRNA ID novel_gra_miR214
Species Gossypium raimondii
Class miRNA
Genome position Chr7:23197113-23197192 [+]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 21
Mature sequence(if miRNA) 60 - UGUGUCAAGUUUCUCAUGACA - 80
Stem-loop(if miRNA) -- UG       G                    -  UGCU
  U  UGGGAAA UUGACACAACUAAGACACCU UC    C
  |  ||||||| |||||||||||||||||||| ||    U
  A  ACUCUUU AACUGUGUUGAUUCUGUGGA AG    C
AC GU       G                    U  UUUA
Stem-loop sequence UUGUGGGAAAGUUGACACAACUAAGACACCUUCUGCUCUCAUUUGAUAGGUGUCUUAGUUGUGUCAAGUUUCUCAUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012613177.1
ncRNA:21   ACAGUACUCUUUGAACUGUGU   1
  ||||=|||*||||||||||||
targets:660   UGUCGUGAAAAACUUGACACA   680

2.5 PREDICTED: Gossypium raimondii receptor-like protein 12 (LOC105786674), mRNA receptor-like protein 12(LOC105786674) coding protein psRNATarget