ncRNA ID | novel_gra_miR214 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:23197113-23197192 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 60 - UGUGUCAAGUUUCUCAUGACA - 80 |
Stem-loop(if miRNA) |
-- UG       G                    -  UGCU   U  UGGGAAA UUGACACAACUAAGACACCU UC    C   |  ||||||| |||||||||||||||||||| ||    U   A  ACUCUUU AACUGUGUUGAUUCUGUGGA AG    C AC GU       G                    U  UUUA |
Stem-loop sequence | UUGUGGGAAAGUUGACACAACUAAGACACCUUCUGCUCUCAUUUGAUAGGUGUCUUAGUUGUGUCAAGUUUCUCAUGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012613177.1 |
|
2.5 | PREDICTED: Gossypium raimondii receptor-like protein 12 (LOC105786674), mRNA | receptor-like protein 12(LOC105786674) | coding protein | psRNATarget |