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BaseInfo

ncRNA ID novel_gra_miR209
Species Gossypium raimondii
Class miRNA
Genome position Chr7:1793673-1793746 [+]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 24
Mature sequence(if miRNA) 1 - ACUCUCCCUCAAGGGCUUCCUGCA - 24
Stem-loop(if miRNA) --        U     GC    U   A     CC AA
  ACUCUCCC CAAGG  UUCC GCA UGCCA  G  U
  |||||||| |||||  |||| ||| |||||  |  A
  UGAGAGGG GUUUC  AAGG CGU ACGGU  C  C
AG        -     UA    U   A     CC GU
Stem-loop sequence ACUCUCCCUCAAGGGCUUCCUGCAAUGCCACCGAAUACUGCCCUGGCAAUGCUGGAAAUCUUUGGGGAGAGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012632167.1
ncRNA:24   ACGUCCUUCGGGAACUCCCUCUCA   1
  |*=*|||||||=|||||||||||*
targets:907   UAUUGGAAGCCUUUGAGGGAGAGA   930

2.5 PREDICTED: Gossypium raimondii DELLA protein RGL1-like (LOC105800821), mRNA DELLA protein RGL1-like(LOC105800821) coding protein psRNATarget