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BaseInfo

ncRNA ID	novel_gra_miR205
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr6:2333249-2333353 [-]
Reference genome	Graimondii2_0
Source	SRR616255
Length	21
Mature sequence(if miRNA)	85 - UGAUUUUGGAAGAAUUUCAGC - 105
Stem-loop(if miRNA)	--             A             U C        -----       AGC   UGAUUUUGGAAGA UUUCAGCUGGUUG G CACCAAUG     GUAGAAC   U   ||||||||||||| ||||||||||||| | ||||||||     |||||||   ACUAAAACCUUCU AAGGUUGGCCAAC C GUGGUUGC     UAUUUUG   G CA             C             U A        AUGGU       GGC
Stem-loop sequence	UGAUUUUGGAAGAAUUUCAGCUGGUUGUGCCACCAAUGGUAGAACAGCUGCGGGUUUUAUUGGUACGUUGGUGACUCAACCGGUUGGAACUCUUCCAAAAUCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012632784.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *=||||||||||||||||*|| targets:2033   CUUGAAAUUCUUCCAAAACCA   2053 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized protein At1g04910 (LOC105801503), mRNA	hypothetical protein(LOC105801503)	coding protein	psRNATarget
XM_012594954.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *||||||*||||||||||*|| targets:343   ACUGAAAGUCUUCCAAAAACA   363 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105773233 (LOC105773233), transcript variant X2, mRNA	uncharacterized LOC105773233(LOC105773233)	coding protein	psRNATarget
XM_012594955.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *||||||*||||||||||*|| targets:343   ACUGAAAGUCUUCCAAAAACA   363 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105773233 (LOC105773233), transcript variant X3, mRNA	uncharacterized LOC105773233(LOC105773233)	coding protein	psRNATarget
XM_012594953.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *||||||*||||||||||*|| targets:343   ACUGAAAGUCUUCCAAAAACA   363 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105773233 (LOC105773233), transcript variant X1, mRNA	uncharacterized LOC105773233(LOC105773233)	coding protein	psRNATarget
XM_012629197.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *||||||*||||||||||*|| targets:1725   ACUGAAAGUCUUCCAAAAACA   1745 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105798935 (LOC105798935), mRNA	uncharacterized LOC105798935(LOC105798935)	coding protein	psRNATarget
XM_012594111.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *||||||*||||||||||*|| targets:1789   ACUGAAAGUCUUCCAAAAACA   1809 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105772696 (LOC105772696), mRNA	uncharacterized LOC105772696(LOC105772696)	coding protein	psRNATarget
XM_012619284.1	ncRNA:21   CGACUUUAAGAAGGUUUUAGU   1   *|||*|||||||||||||*|| targets:468   CCUGUAAUUCUUCCAAAAGCA   488 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105791255 (LOC105791255), mRNA	hypothetical protein(LOC105791255)	coding protein	psRNATarget