ncRNA ID | novel_gra_miR200 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr6:8345035-8345122 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAGCAACUGGACAUCCAAGUUGGC - 24 |
Stem-loop(if miRNA) |
--              UAU  G  -AGUCCA    AAAUUUAUUU   CAACUUGGAUGUCU   GU GC       AAUU          A   ||||||||||||||   || ||       ||||          A   GUUGAACCUACAGG   CA CG       UUUU          U CG              --U  A  AUCUUAC    AUACAAAAAU |
Stem-loop sequence | CAACUUGGAUGUCUUAUGUGGCAGUCCAAAUUAAAUUUAUUUAAUUAAAAACAUAUUUUCAUUCUAGCAACUGGACAUCCAAGUUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012600821.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105777504 (LOC105777504), mRNA | uncharacterized LOC105777504(LOC105777504) | coding protein | psRNATarget |