ncRNA ID | novel_gra_miR199 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr6:9135047-9135220 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGGCCUGUGAAACAGUCGUGUGA - 24 |
Stem-loop(if miRNA) |
--        UGAGA          -CACA        GG  ACAAACA  C    -             -----     U  U     CA   ACACGGCU     UAUGGGCUGU     AGACCGUG  AU       GC UGAU UACACGGUUGUGU     GUCAU UA UAUUU  G   ||||||||     ||||||||||     ||||||||  ||       || |||| |||||||||||||     ||||| || |||||  G   UGUGCUGA     GUGUCCGGCA     UCUGGCAC  UG       UG ACUA GUGUGUUAGCACA     CGGUA AU AUGAG  U AG        -CAAA          CACAA        AU  -AGAGAC  A    U             GAAUC     C  U     UG |
Stem-loop sequence | ACACGGCUUGAGAUAUGGGCUGUCACAAGACCGUGGGAUACAAACAGCCUGAUUACACGGUUGUGUGUCAUUUAUUAUUUCAGGUGUGAGUAUUACAUGGCCUAAGACACGAUUGUGUGUAUCAAGUCAGAGAGUUACACGGUCUAACACACGGCCUGUGAAACAGUCGUGUGA |