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BaseInfo

ncRNA ID novel_gra_miR198
Species Gossypium raimondii
Class miRNA
Genome position Chr11:1682053-1682222 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 147 - AGGGAGGUAAUGGAGCUUAACGGU - 170
Stem-loop(if miRNA) --U     A                             A     A       AAGUU    AUGCCAACUUGGGUGUCCAAUUGCUG
   GUUAA CUCUGUUACCUUCCUAACGGCAGUCCUAC UGGCA UCCAAAU     UUAA                          A
   ||||| ||||||||||||||||||||||||||||| ||||| |||||||     ||||                          G
   CAAUU GAGGUAAUGGAGGGAUUGUCGUUAGGAUG ACCGU AGGUUUA     AUUU                          A
UGG     C                             C     C       -----    GAGUAAAUUAGUUUAUGGAUAUAAGU
Stem-loop sequence UGUUAAACUCUGUUACCUUCCUAACGGCAGUCCUACAUGGCAAUCCAAAUAAGUUUUAAAUGCCAACUUGGGUGUCCAAUUGCUGAGAUGAAUAUAGGUAUUUGAUUAAAUGAGUUUAAUUUGGACUGCCACGUAGGAUUGCUGUUAGGGAGGUAAUGGAGCUUAACGGU