| ncRNA ID | novel_gra_miR196 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr6:6252843-6252940 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255;SRR616256;SRR616257 |
| Length | 21 |
| Mature sequence(if miRNA) | 78 - UUGUGAUGUUUGUGAGGAACA - 98 |
| Stem-loop(if miRNA) |
-- ------ UCU C CUGC AU UUCCUCACAAAUAUCACAAU ACCUA CUAGU UA AUUC U |||||||||||||||||||| ||||| ||||| || |||| AAGGAGUGUUUGUAGUGUUA UGGGU GGUUA GU UAAG U AC UUAUUU -UU A ---U CU |
| Stem-loop sequence | UUCCUCACAAAUAUCACAAUACCUAUCUCUAGUCUACUGCAUUCAUUUUCGAAUUUGAAUUGGUUUGGGUUUUAUUAUUGUGAUGUUUGUGAGGAACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012628252.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable polygalacturonase At1g80170 (LOC105798253), transcript variant X4, mRNA | probable polygalacturonase At1g80170(LOC105798253) | coding protein | psRNATarget | |||||||||
| XM_012628251.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable polygalacturonase At1g80170 (LOC105798253), transcript variant X3, mRNA | probable polygalacturonase At1g80170(LOC105798253) | coding protein | psRNATarget |