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BaseInfo

ncRNA ID novel_gra_miR194
Species Gossypium raimondii
Class miRNA
Genome position Chr6:42498467-42498586 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - UAAGACCGUGGUUAGACUAUGGCA - 24
Stem-loop(if miRNA) --        G        - -A        -A   AAGAC    GU UG       AA    A
  UCAUGGUU GACCAUGG C  AUGUUUAA  UGU     CAUA  U  GUUAUGG  UUUU A
  |||||||| |||||||| |  ||||||||  |||     ||||  |  |||||||  ||||
  GGUAUCAG UUGGUGCC G  UGUAAGUU  ACA     GUAU  G  CAAUACC  AAAA U
AC        A        A AA        CC   -----    UG GU       AG    G
Stem-loop sequence UCAUGGUUGGACCAUGGCAAUGUUUAAAUGUAAGACCAUAGUUUGGUUAUGGAAUUUUAAUGAAAAGACCAUAACUGGGUUAUGACACCUUGAAUGUAAGACCGUGGUUAGACUAUGGCA