ncRNA ID | novel_gra_miR188 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr6:44875600-44875786 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 164 - ACGGAGCUUAACGGUAAAGUGACC - 187 |
Stem-loop(if miRNA) |
--               A   UA            C ACA  C     C            -      --UA   -GCC      --GA    -  A   UCACUUUACCGUUAA CUC  UUACCUCCCUAA G   GU CUACG GGCAGUCUAAAU AGGUUU    AAU    AACUUA    UGUC CA U   ||||||||||||||| |||  |||||||||||| |   || ||||| |||||||||||| ||||||    |||    ||||||    |||| || U   AGUGAAAUGGCAAUU GAG  AAUGGAGGGAUU C   CA GAUGC CCGUUAGGUUUA UUUAAA    UUA    UUGGAU    GUAG GU G CC               C   GC            A -CG  A     A            A      UAAA   AUUU      AAAA    A  A |
Stem-loop sequence | UCACUUUACCGUUAAACUCUAUUACCUCCCUAACGACAGUCCUACGCGGCAGUCUAAAUAGGUUUUAAAUGCCAACUUAGAUGUCCAAUUGAUGAGAUGAAAAUAGGUUUUUAAUUAAAUAAAUUUAAUUUGGAUUGCCACGUAGAACGCCAUUAGGGAGGUAACGGAGCUUAACGGUAAAGUGACC |