| ncRNA ID | novel_gra_miR187 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr6:44480245-44480315 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255;SRR616257 |
| Length | 22 |
| Mature sequence(if miRNA) | 50 - AAGAAUUGAAAUGGAUGUUCUG - 71 |
| Stem-loop(if miRNA) |
--A AUUCA C -UA - AG AAUAUCCAUUU UC UC AAGUUC C U ||||||||||| || || |||||| | UUGUAGGUAAA AG AG UUUAAG G U GUC -GUUA A UCC U GU |
| Stem-loop sequence | AAAUAUCCAUUUAUUCAUCCUCUAAAGUUCCAGUUUGGUGAAUUUCCUGAAGAAUUGAAAUGGAUGUUCUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012615469.1 |
|
2.5 | PREDICTED: Gossypium raimondii manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like (LOC105788525), transcript variant X3, mRNA | manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like(LOC105788525) | coding protein | psRNATarget | |||||||||
| XM_012589008.1 |
|
3.0 | PREDICTED: Gossypium raimondii outer envelope pore protein 21, chloroplastic (LOC105768814), mRNA | outer envelope pore protein 21, chloroplastic(LOC105768814) | coding protein | psRNATarget |