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BaseInfo

ncRNA ID novel_gra_miR186
Species Gossypium raimondii
Class miRNA
Genome position Chr6:29997326-29997425 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 77 - AAAGCGCUCUGACGUGGACGCGAU - 100
Stem-loop(if miRNA) --   AG         CA           CA   CA   A       CCU
  CGC  CCACGUCAG  CGCUUUGCUGA  UGG  ACA AUCGUGU   C
  |||  |||||||||  |||||||||||  |||  ||| |||||||
  GCG  GGUGCAGUC  GCGAAACGACU  ACC  UGU UAGCGCG   U
UA   CA         UC           AC   UG   C       AAG
Stem-loop sequence CGCAGCCACGUCAGCACGCUUUGCUGACAUGGCAACAAAUCGUGUCCUCUGAAGCGCGAUCUGUGUCCACAUCAGCAAAGCGCUCUGACGUGGACGCGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012622070.1
ncRNA:24   UAGCGCAGGUGCAGUCUCGCGAAA   1
  ||||||||||||||||*||||||*
targets:1130   AUCGCGUCCACGUCAGCGCGCUUA   1153

2.5 PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA uncharacterized LOC105793143(LOC105793143) coding protein psRNATarget