ncRNA ID | novel_gra_miR186 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr6:29997326-29997425 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 77 - AAAGCGCUCUGACGUGGACGCGAU - 100 |
Stem-loop(if miRNA) |
--   AG         CA           CA   CA   A       CCU   CGC  CCACGUCAG  CGCUUUGCUGA  UGG  ACA AUCGUGU   C   |||  |||||||||  |||||||||||  |||  ||| |||||||   GCG  GGUGCAGUC  GCGAAACGACU  ACC  UGU UAGCGCG   U UA   CA         UC           AC   UG   C       AAG |
Stem-loop sequence | CGCAGCCACGUCAGCACGCUUUGCUGACAUGGCAACAAAUCGUGUCCUCUGAAGCGCGAUCUGUGUCCACAUCAGCAAAGCGCUCUGACGUGGACGCGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012622070.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA | uncharacterized LOC105793143(LOC105793143) | coding protein | psRNATarget |